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    • the vertebral column
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    • Lesson 1 - Introduction to Human Sexuality
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    • Lesson 5 - The Menstrual Cycle
    • Midterm Exam Study Guide
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    • Lesson 9 - Fetishism
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        • CONTROL OF BACTERIA GROWTH AND ANTIBIOTICS
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      • Bacteria vs Archaeal Structures
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      • Archaea, Bacteria and Eukaryotic Cells
      • MIC- CPP Course Calendar
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    • WET MOUNT
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    • Mannitol salt agar (MSA) Test
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    • Blood Agar
    • Dilution Series and Calculations
    • Phage Plaque Assay
    • MICROBIOLOGY UNKNOWN LAB
    • Microbiology Lab -study guide exam one
    • Ex 2 - Microorganisms
    • EX 3 - aseptic technique
    • Ex 4 - Smear Prep
    • Ex 5 - Simple Stains
    • Ex 6 - Negative Staining
    • Ex 8 - Gram Stain
    • Ex 9 - Acid-Fast Stain
    • Ex 10 - Endospore Stain
    • Ex 11 - Motility Test
    • ex 12 -​ Pure culture technique
    • ex 13 - UV Radiation
    • Ex 14 - Enumeration of Bacteria : Standard Plate Count
    • ex - 15 Effects of Temperature on Growth
    • ex 16 - Hand-washing
    • ex 17 - pH and microbial growth
    • ex 18 - Evaluation of Antiseptics
    • ex 19 - Antibiotic Sensitivity : Kirby-Bauer Method
  • HISTOTECHNOLOGY
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    • The Carbon Cycle - ACTIVITY
    • Evolution - ACTIVITY
    • The Cell Game
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    • THE LORAX ACTIVITY
    • Brittney the Kidney
    • From Soup to Poop
    • MITOSIS - THE NURSERY RHYME
    • Verne the Sperm and friends
      • Verne the Sperm pg1
        • Verne the Sperm pg2
        • Verne the Sperm pg3
        • Verne the Sperm pg4
        • Verne the Sperm pg5
  • Lab 6 - The Chemistry of Cells
  • A History of Anatomy
  • List of Pages
    • Microscopes
  • Cell Membranes and Osmosis
  • Chemistry of Life
  • Muscle Movements
  • The Muscles of the Head, Trunk and Shoulders
  • The Muscles of the Limbs
  • Nervous Tissue
  • The Brain - Anat and Physiology
  • Instructions for Taking BIO 3070
  • MTH 121 Algebra A - Course Schedule and Info
  • Laboratory Calendar CMC Spring 2019
  • Genetics Lab
  • Chemistry and Conversions Lab
  • Digestion and Enzymes Lab
  • Endocrine and Homeostasis Lab
  • Muscles and Reflexes Lab
  • Sensory Lab
  • Immunohistochemistry
  • Blood Lab
  • Heart Rate, Blood Pressure, Electrocardiogram Lab
  • Respiratory Lab
  • Lab 11 Renal Lab
  • Blood Typing Game
  • Body Systems Interactive
  • Ch 9 - The Central Nervous System
  • Ch 10 - Sensory Systems
  • Neuron Virtual Laboratory
  • Virtual Eye Lab
  • Virtual pH Lab
  • Chemical Bonds Virtual Lab
  • Beer's Law Virtual Lab
  • Build-an-Atom Virtual Lab
  • Diffusion Virtual Lab
  • Ohm's Law Virtual Lab
  • New Page
  • Ch 8 - Nervous System

Negative Stain

Ex 6 - Negative Staining

What​ is the Negative Stain Used For?

​    Negative staining allows the morphology, arrangement and size of bacteria, to be viewed microscopically. ​

​How Do Negative Stains Work?

​    Negative staining allows the morphology, arrangement and size of bacteria, to be viewed microscopically. ​

   The negative stain uses the dye nigrosin, which is an acidic dye.  Acids donate hydrogen ions, which are positively charge protons. As acids loose positive charge, the chromophores of the dye becomes negatively charged.
   The cell wall of the bacteria is naturally negatively charged. A rule of chemistry, is that opposite charges attract, and "like charges" (charges that are alike) repel one another. 
   The result is that the bacteria cell remains unstained an appears as a clear object on the slide, while the area surrounding the bacteria cell is darkly stained by the nigrosin stain (also known as "Indian Ink"). 
How do you determine whether a stain is basic or acidic?
  • If the chromophore is positive, it is basic
  • If the chromophore is negative, it is acidic
What is considered a simple stain?
Staining procedures that use only one stain

List the steps for preparing a smear.
1-Place a loopful on water on the slide, 2-place a small amount of the culture onto the slide and mix, 3-allow smear to air dry, 4-flame the slide

List the steps of preparing a simple stain.
1-Cover smear with methylene blue for 30 seconds, 2-Wash with DI water

Of what value is a simple stain?
Determining cell morphology, size, and arrangement

What is the purpose of fixing the smear preparation?
Denatures bacterial enzymes

In heat fixing, what would happen if too much heat were applied?
It would damage the cell's structure and can even crack the slide.

Can dyes other than methylene blue be used for direct staining?
Yes any positively charged dye can be used such as safranin and basic fuchsin

Bacteria can be seen without staining, so why is fixing and staining important for microbiology?
It allows for later reexamination

What does the negative stain technique stain?
Background (the area around the cell, but NOT the cell itself)

Why doesn't a negative stain stain the bacteria?
Ionic repulsion; like charges repel. The bacteria cell wall and the chromophores of the acidic stain both have negative charges.

In which procedure are no heat fixing or strong chemicals used and why not?
Negative stain; to keep the bacteria from getting as distorted

When is the negative stain technique especially useful?
When other staining techniques don't clearly show cell morphology or size

List the steps of the negative staining technique.
1-Place a drop of nigrosin on slide, 2-Mix a loopful of broth culture with the nigrosin (no extra water is needed when the culture is taken from solid media as nigrosin contains a lot of water already), 3-Use a second slide to sweep the mixture across the first slide, making a color gradient, 4-Let the smear air dry

How does bacteria from a negative stain differ from that of a simple stain?
It's clearer because only the background is stained

Why is the size more accurate in a negative stain than in a simple stain?
The lack of heat fixing or strong chemicals keeps from distorting the cell

Could any dye be used in place of nigrosin in a negative stain?
No

What type of dye is used for negative staining? (Acidic or Basic)
Acidic

What kind of stain is the gram stain? How does is allow you to classify bacteria?
Differential; as either gram positive or gram negative

Describe the discovery of the gram stain technique.
Discovered accidentally by Hans Christian Gram in 1884 when he attempted to stain cells and found that some lost their color when the excess stain was washed off

In a gram stain, what are bacteria called when they are easily decolorized?
Gram negative

In a gram stain, what are bacteria called when they retain the primary stain?
Gram positive

Why do bacteria stain differently in a gram stain?
Chemical and physical differences in their cell walls

In a gram stain, what type of cell does this describe?

Crystal violet is picked up by the cell. Iodine reacts with the dye in the cytoplasm to form CV-I. The decolorizing agent dissolves the outer lipopolysaccharide layer, and the CV-I washes out through the thin layer of peptidoglycan.
Gram negative

When is the gram stain most consistent?
When done on cultures less than 24 hours old

List the steps of the gram stain technique.
1-Cover smear with crystal violet for 30 seconds and rinse, 2-Cover smear with Gram's iodine for 10 seconds and rinse, 3-Decolorize with alcohol and rinse, 4-Cover smear with safranin for 30 seconds and rinse

Name some gram positive bacteria.
S. aeru, S. epi, S. pyogenes, B. sub, B, meg

Name some gram negative bacteria.
E. coli, P. vulg, Neisseria

Why will old gram positive cells stain gram negative?
They can't retain the primary stain because with time the lipid layer degrades allowing the stain to reach the peptidoglycan

Can iodine be added before the primary stain in a Gram stain?
No

What color does Crystal Violet turn each of the cells in a gram stain?
Purple

What color does Gram's iodine turn each of the cells in a gram stain?
Purple

What color does ethyl alcohol turn each of the cells in a gram stain?
Gram positive-purple; Gram negative-clear

What color does safranin turn each of the cells in a gram stain?
Gram positive-purple; Gram negative-red

Which step can be omitted without affecting determination of the gram stain reaction?
Safranin

Suppose you gram stained a sample from a pure culture of bacteria and observed a field of red and purple cocci. Adjacent cells were not always the same color. What do you conclude?
The culture is old

Suppose you are viewing a gram stained field of red rods and purple cocci through the microscope. What do you conclude?
The culture has been cross-contaminated

Since you can't identify bacteria from a gram stain, why might a physician perform a gram stain on a sample before perscribing an antibiotic?
Because only certain antibiotics work depending on if the bacteria is gram positive or negative

What type of antibiotics work on gram positive bacteria?
Penicillin

What type of antibiotics work on gram negative bacteria?
Tetracycline

If you gram stained human cells, what would happen?
Primary stain would wash away because humans do not have cell walls

What type of stain is the acid-fast stain?
Differential

What is the value of the acid-fast stain?
Allows diagnosing of Mycobacterium and Nocardia, which do not decolorize with acid alcohol

The cell walls of acid-fast organisms have a wax-like lipid called mycolic acid, which does what?
Makes the cell wall impermeable to most stains

What the difference in the Ziehl-Neelsen acid-fast stain and the Kinyoun acid-fast stain?
In the Kinyoun stain (cold stain), the concentrations of phenol and carbolfuchsin are increased so heating isn't necessary

List the steps of the acid-fast stain.
1-Cover smear with carbolfuchsin for 5 minutes and rinse, 2-Wash smear with acid-alcohol on and off and rinse, Cover smear with Brilliant Green K (Methylene Blue) for 1 minute and rinse

What color will an acid-fast positive bacteria be?
Red

What color will an acid-fast negative bacteria be?
Green

Name an acid-fast negative bacteria
E. coli

Name an acid-fast positive bacteria
M. phlei

What is the decolorizing agent in the Gram stain? In the acid-fast stain?
Ethyl alcohol; Acid-alcohol

What diseases are diagnosed using the acid-fast staining technique?
Tuberculosis and Leprosy

What is phenol and what percent is its usual application?
Disinfectant; 5%

How might the acid-fast characteristic of Mycobacterium enhance the organism's ability to cause disease?
The lipids in their cell wall give extra protection; they are not easily phagocytized

Clinical specimens suspected of containing Mycobacterium are digested with sodium hydroxide for 30 minutes prior to staining. Why is this technique used? Why isn't this technique used for staining other bacteria?
To remove unwanted bacteria from specimen; the sodium hydroxide would kill other bacteria

What are the most familiar genera that form endospores?
Bacillus and Clostridium

Why are endospores called resting bodies?
Because they do not metabolize and are resistant to many harsh conditions

When are endospores formed?
When essential nutrients or water are not available

What happens to the cell when an endospore is formed?
It disintegrates

Many bacteria secrete chemicals that adhere to their surfaces, forming a viscous coat. What is this structure called when it is round or oval shaped? Irregularly shaped and loosely bound?
Capsule; Slime layer

How is a bacteria's ability to form a capsule determined?
Genetically

How is the size of a bacteria's capsule determined?
The medium it's growing on

What are most capsules composed of?
Polysaccharides, which are uncharged

Because of a capsules nonionic nature, _____ stains will not adhere to it.
Simple

How must a capsule be stained in order to view it under a microscope?
The background must be stained, leaving the capsules unstained

Capsules have a very important role in the _____ of some bacteria.
Virulence

How do capsules contribute to the virulence of some bacteria?
Capsules are not easily phagocytized

These thin proteinaceous structures that originate in the cytoplasm and project out from the cell wall are the most common means of motility in bacteria
Flagella

List the steps of an endospore stain.
1-Place a piece of paper towel over the slide, 2-Cover the paper with malachite green, 3-Steam the slide for 5 minutes then rinse, 4-Cover smear with safranin for 30 seconds and rinse

List the steps of a capsule stain.
1-Place a loopful of congo red on slide, 2-Put a thick smear of bacteria in the congo red and mix, 3-Let smear air dry, 4-Drip acid-alcohol on slide for 15 seconds and rinse, 5-Cover smear with acid fuchsin for 1 minute and rinse

What are the gram reactions of Clostridium and Bacillus?
Both are gram positive

How might flagella contribute to pathogenicity?
They help evade the immune response

In an endospore stain, how would slides of 24-hour old Bacillus and 72-hour old Bacillus differ?
At 72 hours, endospores would have formed

Of what morphology are most bacteria possessing flagella?
Bacillus

Which morphology does not usually have flagella?
Coccus

What prevents the cell from appearing green in the finished endospore stain?
Vegetative cells are easily decolorized so the green dye washes off

You can see endospores by simple staining. Why not use this technique?
It would be more difficult to pick them out because they would be transparent

How would an endospore stain of Mycobacterium appear?
Mycobacterium's waxy cell wall would retain the green dye, suggesting that they have endospores when they actually do not

What type of culture medium would increase the size of a bacterial capsule?
A medium rich in polysaccharides

Describe the microscopic appearance of encapsulated Streptococcus if stained with safranin and nigrosin.
The bacteria would be red, the capsule clear, and the background purplish-black

In the Dorner endospore stain, a smear covered with carbolfuchsin is steamed, then decolorized with acid-alcohol and counterstained with nigrosin. Describe the microscopic appearance after this procedure.
The endospores should be very bright pink, the bacteria light pink, and the background purplish-black

What makes an agar deep useful?
Some oxygen prefer to grow in less oxygen

What are two ways to determine motility of a bacteria?
Using an agar deep or the hanging drop technique

What evolutionary advantage would there be to the formation of a pellicle in a liquid medium by a bacterium?
They could form colonies and have a greater chance of survival

How can you tell that a medium is sterile?
Compare it with a control

Why is it desirable that microscope lenses be parfocal?
So you don't have to refocus everytime you change objectives

What controls the amount of light reaching the ocular lens?
Diaphragm

Is you lens corrected for chromatic aberrations?
Yes

Name two ways in which you can enhance the resolving power of a microscope.
Decrease the wavelength of light and increase the numerical aperture

What would occur if water were accidentally used in place of immersion oil?
It would not be as clear because water does not have the same refractive index as glass

What advantages does the low power objective have over the oil immersion objective for viewing fungi?
Fungi cells are large so you can see more of the cell



​Organisms Used: 

Escherichia coli (E. coli) - Gram (-) rod
Staphylococcus aureus (Staph. aureus)
  • Staphylococcus aureus is a gram-positive bacteria that is round Gram (+) cocci
Here is an example of what Staphylococcus aureus looks like with the negative stain. homepages.wmich.edu/~rossbach/bios312/LabProcedures/Negative%20Stain%20Procedure.html
Picture
http://www.napavalley.edu/people/srose/PublishingImages/Staphylococcus%20aureus%20(negative%20stain).jpg

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